clustering

Library and tools for similarity measurement, classification and clustering of digital content and segmentation images from digitized document

The end.. and maybe the beginning of the LinuxPMI kernel clustering extensions. Based on openmosix.

DPCfam Workstation version. Runs on Linux-based systems. Developed and tested on Ubuntu 18. DPCfamW uses the moodycamel::ConcurrentQueue library ( https://github.com/cameron314/concurrentqueue ) freely available provided citation (Simplified BSD license). This version replicates the pipeline used in to anlayze UniRef50 (v. 2017_07) as in Unsupervised protein family classification by Density Peak clustering, Russo ET, 2020, PhD Thesis ( http://hdl.handle.net/20.500.11767/116345 ), but with smaller datasets. Largest dataset we analysed is the TESTproteins_cd50.fasta datased we provide in this package. Due to memory bounds we do not guarantee that the abalysis of largest datasets is acheivable with this version.

Clustering documents to get an overview of a corpus