Webservice throws 500 and pg_last_xlog_receive_location on fetch in maintenance mode after helm

Summary

Git fetch throws 500 after GitLab Helm update when in maintenance mode.

In the logs: Function pg_last_xlog_receive_location() is currently not supported for Aurora.

Not related to Aurora as Postgres itself has this function deprecated: https://pgpedia.info/p/pg_last_wal_receive_lsn.html

Version 13.12.12-ee on k8s.

Steps to reproduce

Enable maintenance mode. Reconfigure Gitaly domain using GitLab Helm chart.

What is the current bug behaviour?

$ git fetch origin
remote: 
remote: ========================================================================
remote: 
remote: 500 Internal Server Error
remote: 
remote: ========================================================================
remote: 
fatal: Could not read from remote repository.

What is the expected correct behavior?

The fetch is successful.

Relevant logs and/or screenshots

Both ssh and https fetch fail.

Shell container:

{"content_type":"application/json","correlation_id":"01FH0JQ5W7TKJ6N00YQHJGFCEM","duration_ms":101,"host":"gitlab-webservice-default.gitlab.svc:8181","level":"info","method":"POST","msg":"access","proto":"HTTP/1.1","referrer":"","remote_addr":"172.26.138.246:43600","remote_ip":"<obfuscated>","route":"^/api/","status":500,"system":"http","time":"2021-10-02T13:22:28Z","ttfb_ms":98,"uri":"//api/v4/internal/allowed","user_agent":"GitLab-Shell","written_bytes":39}

Workservice container (Note that GEO is not enabled for the installation):

{"severity":"ERROR","time":"2021-10-02T13:22:28.453Z","correlation_id":"01FH0JQ5W7TKJ6N00YQHJGFCEM","exception.class":"ActiveRecord::StatementInvalid",
"exception.message":"PG::FeatureNotSupported: 
ERROR:  Function pg_last_xlog_receive_location() is currently not supported for Aurora\n","exception.backtrace":[

"ee/lib/gitlab/geo/health_check.rb:24:in `db_replication_lag_seconds'",
"ee/lib/ee/gitlab/geo_git_access.rb:64:in `current_replication_lag'",
"ee/lib/ee/gitlab/geo_git_access.rb:58:in `current_replication_lag_message'",
"ee/lib/ee/gitlab/git_access.rb:57:in `check_for_console_messages'",
"lib/gitlab/git_access.rb:428:in `success_result'",
"lib/gitlab/metrics/instrumentation.rb:160:in `block in success_result'",
"lib/gitlab/metrics/method_call.rb:27:in `measure'",
"lib/gitlab/metrics/instrumentation.rb:160:in `success_result'",
"lib/gitlab/git_access.rb:96:in `check'",
"ee/lib/ee/gitlab/git_access.rb:18:in `check'",
"lib/api/internal/base.rb:103:in `access_check!'",
"lib/api/internal/base.rb:56:in `block in check_allowed'",
"lib/api/internal/base.rb:123:in `with_admin_mode_bypass!'",
"lib/api/internal/base.rb:55:in `check_allowed'",
"ee/lib/ee/api/internal/base.rb:22:in `block in check_allowed'",
"ee/lib/gitlab/ip_address_state.rb:10:in `with'",
"ee/lib/ee/api/internal/base.rb:21:in `check_allowed'",
"lib/api/internal/base.rb:152:in `block (2 levels) in \u003cclass:Base\u003e'",
"ee/lib/gitlab/middleware/ip_restrictor.rb:11:in `call'",
"lib/api/api_guard.rb:213:in `call'",
"lib/gitlab/metrics/elasticsearch_rack_middleware.rb:16:in `call'",
"lib/gitlab/middleware/rails_queue_duration.rb:33:in `call'",
"lib/gitlab/metrics/rack_middleware.rb:16:in `block in call'",
"lib/gitlab/metrics/transaction.rb:56:in `run'",
"lib/gitlab/metrics/rack_middleware.rb:16:in `call'",
"lib/gitlab/middleware/speedscope.rb:13:in `call'",
"lib/gitlab/request_profiler/middleware.rb:17:in `call'",
"lib/gitlab/jira/middleware.rb:19:in `call'",
"lib/gitlab/middleware/go.rb:20:in `call'",
"lib/gitlab/etag_caching/middleware.rb:21:in `call'",
"lib/gitlab/middleware/multipart.rb:172:in `call'",
"lib/gitlab/middleware/read_only/controller.rb:50:in `call'",
"lib/gitlab/middleware/read_only.rb:18:in `call'",
"lib/gitlab/middleware/same_site_cookies.rb:27:in `call'",
"lib/gitlab/middleware/handle_malformed_strings.rb:21:in `call'",
"lib/gitlab/middleware/basic_health_check.rb:25:in `call'",
"lib/gitlab/middleware/handle_ip_spoof_attack_error.rb:25:in `call'",
"lib/gitlab/middleware/request_context.rb:21:in `call'",
"config/initializers/fix_local_cache_middleware.rb:11:in `call'",
"lib/gitlab/middleware/rack_multipart_tempfile_factory.rb:19:in `call'",
"lib/gitlab/metrics/requests_rack_middleware.rb:76:in `call'",
"lib/gitlab/middleware/release_env.rb:12:in `call'"
]

,"user.username":null,"tags.program":"web","tags.locale":"en","tags.feature_category":"source_code_management","tags.correlation_id":"01FH0JQ5W7TKJ6N00YQHJGFCEM"}

No errors on Gitaly. Web interface is operational.

Helm:

helm upgrade --namespace gitlab --install gitlab --version 4.12.12 -f values.yaml gitlab/gitlab

Output of checks

Results of GitLab environment info

Expand for output related to GitLab environment info

# kubectl exec -it pod/gitlab-task-runner-5d667497bb-njjsg -- bash

$ gitlab-rake gitlab:env:info

System information
System:		
Proxy:		no
Current User:	git
Using RVM:	no
Ruby Version:	2.7.2p137
Gem Version:	3.1.4
Bundler Version:2.1.4
Rake Version:	13.0.3
Redis Version:	unknown
Git Version:	unknown
Sidekiq Version:5.2.9
Go Version:	unknown

GitLab information
Version:	13.12.12-ee
Revision:	7f1dc4f5c29
Directory:	/srv/gitlab
DB Adapter:	PostgreSQL
DB Version:	11.9
URL:		https://gitlab.domain.com
HTTP Clone URL:	https://gitlab.domain.com/some-group/some-project.git
SSH Clone URL:	git@git.domain.com:some-group/some-project.git
Elasticsearch:	no
Geo:		no
Using LDAP:	no
Using Omniauth:	yes
Omniauth Providers: saml

GitLab Shell
Version:	13.18.1
Repository storage paths:
- default: 	/var/opt/gitlab/repo
GitLab Shell path:		/home/git/gitlab-shell
Git:		/usr/bin/git

Results of GitLab application Check

Check fails but I think it's a Helm thing.

Expand for output related to the GitLab application check

$ gitlab-rake gitlab:check SANITIZE=true
Checking GitLab subtasks ...
Checking GitLab Shell ...
GitLab Shell: ... GitLab Shell version >= 13.18.1 ? ... OK (13.18.1)
Running /home/git/gitlab-shell/bin/check
gitlab-shell self-check failed
Try fixing it:
Make sure GitLab is running;
Check the gitlab-shell configuration file:
sudo -u git -H editor /home/git/gitlab-shell/config.yml
Please fix the error above and rerun the checks.
Checking GitLab Shell ... Finished
Checking Gitaly ...
Gitaly: ... default ... OK
Checking Gitaly ... Finished
Checking Sidekiq ...
Sidekiq: ... Running? ... no
Try fixing it:
sudo -u git -H RAILS_ENV=production bin/background_jobs start
For more information see:
doc/install/installation.md in section "Install Init Script"
see log/sidekiq.log for possible errors
Please fix the error above and rerun the checks.
Checking Sidekiq ... Finished
Checking Incoming Email ...
Incoming Email: ... Reply by email is disabled in config/gitlab.yml
Checking Incoming Email ... Finished
Checking LDAP ...
LDAP: ... LDAP is disabled in config/gitlab.yml
Checking LDAP ... Finished
Checking GitLab App ...
Git configured correctly? ... no
Trying to fix error automatically. ...Failed
Try fixing it:
sudo -u git -H "/usr/bin/git" config --global core.autocrlf "input"
For more information see:
doc/install/installation.md in section "GitLab"
Database config exists? ... yes
All migrations up? ... yes
Database contains orphaned GroupMembers? ... no
GitLab config exists? ... yes
GitLab config up to date? ... yes
Log directory writable? ... yes
Tmp directory writable? ... yes
Uploads directory exists? ... yes
Uploads directory has correct permissions? ... yes
Uploads directory tmp has correct permissions? ... skipped (no tmp uploads folder yet)
Init script exists? ... no
Try fixing it:
Install the init script
For more information see:
doc/install/installation.md in section "Install Init Script"
Please fix the error above and rerun the checks.
Init script up-to-date? ... can't check because of previous errors
Projects have namespace: ...
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100/835 ... yes
926/836 ... yes
Redis version >= 5.0.0? ... yes
Ruby version >= 2.7.2 ? ... yes (2.7.2)
Git version >= 2.31.0 ? ... no
Your git bin path is "/usr/bin/git"
Try fixing it:
Update your git to a version >= 2.31.0 from Unknown
Please fix the error above and rerun the checks.
Git user has default SSH configuration? ... yes
Active users: ... 705
Is authorized keys file accessible? ... no
Trying to fix error automatically. ...Exception: No such file or directory @ rb_sysopen - /home/git/.ssh/authorized_keys
GitLab configured to store new projects in hashed storage? ... yes
All projects are in hashed storage? ... yes
Elasticsearch version 7.x (6.4 - 6.x deprecated to be removed in 13.8)? ... skipped (elasticsearch is disabled)
Checking GitLab App ... Finished
Checking GitLab subtasks ... Finished

Possible fixes

This resolves itself if maintenance mode is disabled and workservice containers are recreated.