bioinformatics

SonicParanoid is a stand-alone software tool for the identification of orthologous relationships among multiple species.

For details go to the wiki-page

Software to compute the melting temperature of nucleic acid duplexes

Join On Integers

DuploMap is designed to improve precision and recall of long-read alignments in segmental duplications.

Fork of https://github.com/mgtools/MinPath

Calculating codon usage in a DNA sequence using OMP in C++.

[mirror] BAM file annotation with mutations.

This is just a mirror. Head over to Codeberg.org for active development

GapProber is a probabilistic method for filling up gaps in genome assemblies.

mirSVR-based tool to predict the effects of SNPs on miRNA:target interactions