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Handle orphans when removing soft deleted groups

Yorick Peterse requested to merge fix-remove-undeleted-groups-orphans into master

This fixes the migration from https://gitlab.com/gitlab-org/gitlab-ce/merge_requests/7528 so it handles orphans as mentioned in https://gitlab.com/gitlab-org/gitlab-ce/merge_requests/7528/diffs#note_18800962.

This needs to go in 8.14.0 as otherwise customers may run into the same problem.

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