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Add note to GraphQL about permissions

Tim Rizzi requested to merge trizzi-master-patch-77207 into master

What does this MR do and why?

In #364441 (closed), it was discovered that the permissions for the group-level settings of the Package Registry and Dependency Proxy are not in sync between the GraphQL API and the UI. Since we cannot update the UI settings as it would change for everyone, we are scheduling a breaking change in 16.0 that will update the GraphQL permissions level to Owner.

This MR updates the documentation to alert users of this discrepancy.

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