RNA

StCsm next-generation sequencing data processing Nextflow pipeline.

StCsm sequencing data analysis in R programming language.

Software to compute the melting temperature of nucleic acid duplexes

sequence identification/assignment and base-pairing restraints for RNA/DNA models in EM and MX

RNA fragment assembly with secondary structure and experimental restraints

Course of the subject "Analysis of transcriptomic data" whose syllabus I developed and taught in 2022 for the International University of Valencia (made in Markdown).

A set of tools to do biological operations, written for Nim.

Haruspex is a Convolutional Neural Network capable of recognizing and predicting secondary structure elements and nucleotides in Cryo-EM reconstruction density.

Notebook Jupyter para estudiar la capacidad de generalización de Learning Vector Quantization (LVQ) sobre el problema de reconcimiento de dígitos escritos a mano

Some Bioinformatics example about dna, genes and other.

Taxonomic assignment of the shotgun sequencing data. Both assembled and non-assembled reads.