bioinformatics

Common Workflow Language - computational workflows @ UNLOCK

Trimming, alignment and variant identification tool. Made to help professional make a quick variant identification through an easy to follow user interface developed in R with the Shiny framework.

Tavit (Trimming, Alignment and Variant Identification Tool) pipeline made in Python with Anaconda.

Run Oxford Nanopore MinION software in Docker containers

Snakemake RNAseq processing pipeline (STAR or Salmon) via a SLURM cluster